A checkbox present at the top left of the Sequence Map window allows to toggle on and off Feature display.
#SERIAL CLONER 2 ALIGN PROTEIN SEQUENCES SERIAL#
Text visualization of the Features With Serial Cloner 2.1, it is now possible to see the Features with the Sequence Map. Finally, it is now possible (since v2.0) to resize the Graphic map in Height AND Width. It is also possible to display only certain sites together with the Features.
2ģ Note that it is now possible (since V2.0) to move the Restriction site and Features name boxes to highlight some of them before printing or copying the map. A double Click selects the corresponding sequence in the parent Sequence Window. A simple click on a Feature name selects the corresponding portion in the map. It is possible to switch between a Graphic Map with and without Feature using the checkbox present in the top left of the window ('Features'). They are represented by colored boxes with or without a pointing arrow. Features can be displayed in the Graphic Map. The scrolling of the sequence when selecting has also been improved.
#SERIAL CLONER 2 ALIGN PROTEIN SEQUENCES WINDOWS#
NB: note that since version 2.1 it is now possible to change the Sequence window size (as well as the character size under Windows AND MacOSX). It is possible to show/hide them using the 'Show Features' checkbox.Ģ When the insertion point is located within a Feature, the corresponding Feature's name is indicated above the Sequence Field. Display of Features in the Sequence Window Features are visible in color in the sequence window. This is particularly useful when deleting multiple Features. The button then gets red to indicate that no confirmation will be asked for. This pop-message can be avoided if you press the key before clicking on the button. A pop-up message will ask for confirmation before deleting a Feature (there is no undo). The + and button are used to add and delete a Feature respectively. To alter the order simply drag the Feature at another position in the list. The order in the list dictate the order by which Features will be drawn, and this can be important in case they overlap. To change the Feature color, click on the colored box and select another color. A feature can have or not a pointing arrow ('Arrow' checkbox). To decide to Show or Hide all features at once, press the key before clicking on the checkbox. Shown features are listed in Bold characters. One can select whether a feature will actually be displayed on the map (using the 'Show' checkbox). The Edit button is used to toggle between the 'protected' mode where no unwanted modification can be done and the 'Edit' mode. To edit (add/delete/modify) Features, one has to be in the 'Edit' mode. A list of Features is shown on the left double clicking on one will select the corresponding nucleotide sequence. Accessing features in the Sequence window A new tab has been added (Features) that gives access to features characteristics and management. The symbol indicate that this function has been added or updated in V2.1 I. Here are some descriptions and hints about these new possibilities. Handling Features/Annotations Since version 2.0, Serial Cloner handles annotations and features.
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